HL_6ZSA_057

3D structure

PDB id

6ZSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UCACAA

Length

6 nucleotides

Bulged bases

6ZSA|1|XA|C|3157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSA_057 not in the Motif Atlas

Geometric match to HL_4WSB_001

Geometric discrepancy: 0.2249

The information below is about HL_4WSB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19413.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

9

Unit IDs

6ZSA|1|XA|U|3154
6ZSA|1|XA|C|3155
6ZSA|1|XA|A|3156
6ZSA|1|XA|C|3157
6ZSA|1|XA|A|3158
6ZSA|1|XA|A|3159

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XE

39S ribosomal protein L3, mitochondrial

Chain XL

39S ribosomal protein L14, mitochondrial

Chain XO

39S ribosomal protein L17, mitochondrial

Chain XQ

39S ribosomal protein L19, mitochondrial