HL_6ZSB_003

3D structure

PDB id

6ZSB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AGCAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSB_003 not in the Motif Atlas

Geometric match to HL_1U6B_004

Geometric discrepancy: 0.2366

The information below is about HL_1U6B_004

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

6ZSB|1|AA|A|768
6ZSB|1|AA|G|769
6ZSB|1|AA|C|770
6ZSB|1|AA|A|771
6ZSB|1|AA|A|772
6ZSB|1|AA|U|773

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AL

28S ribosomal protein S15, mitochondrial

Chain AN

28S ribosomal protein S17, mitochondrial