HL_6ZSB_022

3D structure

PDB id

6ZSB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AGGCGAU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSB_022 not in the Motif Atlas

Geometric match to HL_2ZNI_001

Geometric discrepancy: 0.1948

The information below is about HL_2ZNI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6ZSB|1|XA|A|1746
6ZSB|1|XA|G|1747
6ZSB|1|XA|G|1748
6ZSB|1|XA|C|1749
6ZSB|1|XA|G|1750
6ZSB|1|XA|A|1751
6ZSB|1|XA|U|1752

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 3

39S ribosomal protein L35, mitochondrial

Chain XH

39S ribosomal protein L9, mitochondrial

Chain XM

39S ribosomal protein L15, mitochondrial

Chain XX

39S ribosomal protein L28, mitochondrial

Chain i

39S ribosomal protein L51, mitochondrial