HL_6ZSC_020

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGGAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSC_020 not in the Motif Atlas

Homologous match to HL_6CZR_103

Geometric discrepancy: 0.1068

The information below is about HL_6CZR_103

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6ZSC|1|AA|U|1580
6ZSC|1|AA|G|1581
6ZSC|1|AA|G|1582
6ZSC|1|AA|A|1583
6ZSC|1|AA|A|1584
6ZSC|1|AA|A|1585

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A3

Aurora kinase A-interacting protein

Chain XA

Large subunit ribosomal RNA; LSU rRNA