HL_6ZSC_022

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGGCGAU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSC_022 not in the Motif Atlas

Geometric match to HL_5J7L_141

Geometric discrepancy: 0.1287

The information below is about HL_5J7L_141

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37369.2

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

9

Unit IDs

6ZSC|1|XA|A|1746
6ZSC|1|XA|G|1747
6ZSC|1|XA|G|1748
6ZSC|1|XA|C|1749
6ZSC|1|XA|G|1750
6ZSC|1|XA|A|1751
6ZSC|1|XA|U|1752

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 3

39S ribosomal protein L35, mitochondrial

Chain XH

39S ribosomal protein L9, mitochondrial

Chain XM

39S ribosomal protein L15, mitochondrial

Chain XX

39S ribosomal protein L28, mitochondrial

Chain i

39S ribosomal protein L51, mitochondrial