HL_6ZSC_034

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUAAAAGCAG

Length

11 nucleotides

Bulged bases

6ZSC|1|XA|A|2181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSC_034 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.4735

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6ZSC|1|XA|C|2175
6ZSC|1|XA|C|2176
6ZSC|1|XA|U|2177
6ZSC|1|XA|A|2178
6ZSC|1|XA|A|2179
6ZSC|1|XA|A|2180
6ZSC|1|XA|A|2181
6ZSC|1|XA|G|2182
6ZSC|1|XA|C|2183
6ZSC|1|XA|A|2184
6ZSC|1|XA|G|2185

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XJ

39S ribosomal protein L11, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial