HL_6ZSE_001

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

UUUGGUCCUAG

Length

11 nucleotides

Bulged bases

6ZSE|1|AA|U|656

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSE_001 not in the Motif Atlas

Homologous match to HL_5J7L_001

Geometric discrepancy: 0.2012

The information below is about HL_5J7L_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89881.5

Basepair signature

cWW-tHW-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6ZSE|1|AA|U|654
6ZSE|1|AA|U|655
6ZSE|1|AA|U|656
6ZSE|1|AA|G|657
6ZSE|1|AA|G|658
6ZSE|1|AA|U|659
6ZSE|1|AA|C|660
6ZSE|1|AA|C|661
6ZSE|1|AA|U|662
6ZSE|1|AA|A|663
6ZSE|1|AA|G|664

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial