HL_6ZSE_004

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CCUAG

Length

5 nucleotides

Bulged bases

6ZSE|1|AA|C|793, 6ZSE|1|AA|A|795

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSE_004 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.2076

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01957.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6ZSE|1|AA|C|792
6ZSE|1|AA|C|793
6ZSE|1|AA|U|794
6ZSE|1|AA|A|795
6ZSE|1|AA|G|796

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial