HL_6ZSE_020
3D structure
- PDB id
- 6ZSE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- UGGAAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZSE_020 not in the Motif Atlas
- Geometric match to HL_4WF9_031
- Geometric discrepancy: 0.2261
- The information below is about HL_4WF9_031
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
6ZSE|1|AA|U|1580
6ZSE|1|AA|G|1581
6ZSE|1|AA|G|1582
6ZSE|1|AA|A|1583
6ZSE|1|AA|A|1584
6ZSE|1|AA|A|1585
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain A3
- Aurora kinase A-interacting protein
- Chain XA
- Large subunit ribosomal RNA; LSU rRNA
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