HL_6ZSE_023
3D structure
- PDB id
- 6ZSE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZSE_023 not in the Motif Atlas
- Homologous match to HL_4WF9_015
- Geometric discrepancy: 0.2328
- The information below is about HL_4WF9_015
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 399
Unit IDs
6ZSE|1|XA|C|1786
6ZSE|1|XA|G|1787
6ZSE|1|XA|C|1788
6ZSE|1|XA|A|1789
6ZSE|1|XA|A|1790
6ZSE|1|XA|G|1791
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain XF
- 39S ribosomal protein L4, mitochondrial
- Chain XU
- 39S ribosomal protein L23, mitochondrial
Coloring options: