HL_6ZTJ_005

3D structure

PDB id

6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6ZTJ|1|AA|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTJ_005 not in the Motif Atlas

Homologous match to HL_5J7L_005

Geometric discrepancy: 0.4153

The information below is about HL_5J7L_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6ZTJ|1|AA|C|207
6ZTJ|1|AA|U|208
6ZTJ|1|AA|U|209
6ZTJ|1|AA|C|210
6ZTJ|1|AA|G|211
6ZTJ|1|AA|G|212

Current chains

Chain AA

16S ribosomal RNA

Nearby chains