HL_6ZTJ_012

3D structure

PDB id

6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

6ZTJ|1|AA|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTJ_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1794

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6ZTJ|1|AA|G|462
6ZTJ|1|AA|U|463
6ZTJ|1|AA|U|464
6ZTJ|1|AA|A|465
6ZTJ|1|AA|A|466
6ZTJ|1|AA|U|467
6ZTJ|1|AA|A|468
6ZTJ|1|AA|C|469
6ZTJ|1|AA|C|470

Current chains

Chain AA

16S ribosomal RNA

Nearby chains