HL_6ZTJ_059

3D structure

PDB id

6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTJ_059 not in the Motif Atlas

Homologous match to HL_5J7L_154

Geometric discrepancy: 0.1082

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6ZTJ|1|BA|G|712
6ZTJ|1|BA|G|713
6ZTJ|1|BA|U|714
6ZTJ|1|BA|A|715
6ZTJ|1|BA|A|716
6ZTJ|1|BA|C|717
6ZTJ|1|BA|A|718
6ZTJ|1|BA|C|719

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain AO

30S ribosomal protein S15

Chain BC

50S ribosomal protein L2