HL_6ZTL_063

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

G(PSU)GCUAACGU

Length

10 nucleotides

Bulged bases

6ZTL|1|BA|U|958, 6ZTL|1|BA|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTL_063 not in the Motif Atlas

Homologous match to HL_5J7L_159

Geometric discrepancy: 0.1085

The information below is about HL_5J7L_159

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZTL|1|BA|G|954
6ZTL|1|BA|PSU|955
6ZTL|1|BA|G|956
6ZTL|1|BA|C|957
6ZTL|1|BA|U|958
6ZTL|1|BA|A|959
6ZTL|1|BA|A|960
6ZTL|1|BA|C|961
6ZTL|1|BA|G|962
6ZTL|1|BA|U|963

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BN

50S ribosomal protein L16