3D structure

PDB id
6ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state bound to NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GUUAAUC
Length
7 nucleotides
Bulged bases
6ZTL|1|BA|U|1325, 6ZTL|1|BA|U|1329
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ZTL_070 not in the Motif Atlas
Homologous match to HL_5J7L_166
Geometric discrepancy: 0.1702
The information below is about HL_5J7L_166
Detailed Annotation
Pseudoknot geometry with 3' bulge
Broad Annotation
No text annotation
Motif group
HL_57176.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
14

Unit IDs

6ZTL|1|BA|G|1324
6ZTL|1|BA|U|1325
6ZTL|1|BA|U|1326
6ZTL|1|BA|A|1327
6ZTL|1|BA|A|1328
6ZTL|1|BA|U|1329
6ZTL|1|BA|C|1330

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BO
50S ribosomal protein L17
Chain BT
50S ribosomal protein L22

Coloring options:


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