HL_6ZTM_090

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

6ZTM|1|BA|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTM_090 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.0882

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

6ZTM|1|BA|C|2248
6ZTM|1|BA|U|2249
6ZTM|1|BA|G|2250
6ZTM|1|BA|OMG|2251
6ZTM|1|BA|G|2252
6ZTM|1|BA|G|2253
6ZTM|1|BA|C|2254
6ZTM|1|BA|G|2255
6ZTM|1|BA|G|2256

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain BN

50S ribosomal protein L16

Chain BX

50S ribosomal protein L27