3D structure

PDB id
6ZTM (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state without NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GAAGACGAC
Length
9 nucleotides
Bulged bases
6ZTM|1|BA|A|2820
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ZTM_105 not in the Motif Atlas
Homologous match to HL_5J7L_201
Geometric discrepancy: 0.0828
The information below is about HL_5J7L_201
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_64690.6
Basepair signature
cWW-cSW-F-F-F-F
Number of instances in this motif group
9

Unit IDs

6ZTM|1|BA|G|2819
6ZTM|1|BA|A|2820
6ZTM|1|BA|A|2821
6ZTM|1|BA|G|2822
6ZTM|1|BA|A|2823
6ZTM|1|BA|C|2824
6ZTM|1|BA|G|2825
6ZTM|1|BA|A|2826
6ZTM|1|BA|C|2827

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BD
50S ribosomal protein L3
Chain BO
50S ribosomal protein L17

Coloring options:


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