HL_6ZTO_027

3D structure

PDB id

6ZTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

6ZTO|1|AA|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTO_027 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.2522

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6ZTO|1|AA|U|1165
6ZTO|1|AA|G|1166
6ZTO|1|AA|A|1167
6ZTO|1|AA|U|1168
6ZTO|1|AA|A|1169
6ZTO|1|AA|A|1170
6ZTO|1|AA|A|1171

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AU

30S ribosomal protein S21