HL_6ZTP_033
3D structure
- PDB id
- 6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in uncoupled state 6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAGCCUGG(H2U)AG
- Length
- 11 nucleotides
- Bulged bases
- 6ZTP|1|AW|C|17, 6ZTP|1|AW|U|17|||A, 6ZTP|1|AW|G|18, 6ZTP|1|AW|G|19
- QA status
- Modified nucleotides: H2U
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZTP_033 not in the Motif Atlas
- Homologous match to HL_4LCK_001
- Geometric discrepancy: 0.1589
- The information below is about HL_4LCK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZTP|1|AW|C|13
6ZTP|1|AW|A|14
6ZTP|1|AW|G|15
6ZTP|1|AW|C|16
6ZTP|1|AW|C|17
6ZTP|1|AW|U|17|||A
6ZTP|1|AW|G|18
6ZTP|1|AW|G|19
6ZTP|1|AW|H2U|20
6ZTP|1|AW|A|21
6ZTP|1|AW|G|22
Current chains
- Chain AW
- tRNA(fmet) P-site
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- 50S ribosomal protein L5
Coloring options: