HL_6ZU1_073

3D structure

PDB id

6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6ZU1|1|BA|U|1396, 6ZU1|1|BA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU1_073 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.0807

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6ZU1|1|BA|G|1389
6ZU1|1|BA|U|1390
6ZU1|1|BA|U|1391
6ZU1|1|BA|A|1392
6ZU1|1|BA|A|1393
6ZU1|1|BA|U|1394
6ZU1|1|BA|A|1395
6ZU1|1|BA|U|1396
6ZU1|1|BA|U|1397
6ZU1|1|BA|C|1398

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BU

50S ribosomal protein L23