HL_6ZVH_037
3D structure
- PDB id
- 6ZVH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EDF1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCUUUCACC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZVH_037 not in the Motif Atlas
- Homologous match to HL_5AH5_006
- Geometric discrepancy: 0.5955
- The information below is about HL_5AH5_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZVH|1|x|G|31
6ZVH|1|x|C|32
6ZVH|1|x|U|33
6ZVH|1|x|U|34
6ZVH|1|x|U|35
6ZVH|1|x|C|36
6ZVH|1|x|A|37
6ZVH|1|x|C|38
6ZVH|1|x|C|39
Current chains
- Chain x
- E-site tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain F
- 40S ribosomal protein S5
- Chain O
- 40S ribosomal protein S14
- Chain c
- 40S ribosomal protein S28
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