HL_6ZXD_036

3D structure

PDB id

6ZXD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State F1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACAGAUUGAUAGCUCUUU

Length

18 nucleotides

Bulged bases

6ZXD|1|2|U|1300

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXD|1|2|A|1291
6ZXD|1|2|C|1292
6ZXD|1|2|A|1293
6ZXD|1|2|G|1294
6ZXD|1|2|A|1295
6ZXD|1|2|U|1296
6ZXD|1|2|U|1297
6ZXD|1|2|G|1298
6ZXD|1|2|A|1299
6ZXD|1|2|U|1300
6ZXD|1|2|A|1301
6ZXD|1|2|G|1302
6ZXD|1|2|C|1303
6ZXD|1|2|U|1304
6ZXD|1|2|C|1305
6ZXD|1|2|U|1306
6ZXD|1|2|U|1307
6ZXD|1|2|U|1308

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain P

40S ribosomal protein S15

Chain d

40S ribosomal protein S29

Chain f

Ubiquitin-40S ribosomal protein S27a