HL_6ZXF_004

3D structure

PDB id

6ZXF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCCCUUCGCGGGGG

Length

14 nucleotides

Bulged bases

6ZXF|1|2|U|197, 6ZXF|1|2|C|201

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXF|1|2|C|193
6ZXF|1|2|C|194
6ZXF|1|2|C|195
6ZXF|1|2|C|196
6ZXF|1|2|U|197
6ZXF|1|2|U|198
6ZXF|1|2|C|199
6ZXF|1|2|G|200
6ZXF|1|2|C|201
6ZXF|1|2|G|202
6ZXF|1|2|G|203
6ZXF|1|2|G|204
6ZXF|1|2|G|205
6ZXF|1|2|G|206

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain I

40S ribosomal protein S8