HL_6ZXF_006
3D structure
- PDB id
- 6ZXF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a late human pre-40S ribosomal subunit - State G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUCGCCGUGCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZXF_006 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.3843
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6ZXF|1|2|G|377
6ZXF|1|2|U|378
6ZXF|1|2|C|379
6ZXF|1|2|G|380
6ZXF|1|2|C|381
6ZXF|1|2|C|382
6ZXF|1|2|G|383
6ZXF|1|2|U|384
6ZXF|1|2|G|385
6ZXF|1|2|C|386
6ZXF|1|2|C|387
Current chains
- Chain 2
- pre-18S ribosomal RNA
Nearby chains
- Chain I
- 40S ribosomal protein S8
- Chain L
- 40S ribosomal protein S11
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