HL_6ZXH_015
3D structure
- PDB id
- 6ZXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UG(PSU)UCAAAG
- Length
- 9 nucleotides
- Bulged bases
- 6ZXH|1|2|G|821
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZXH_015 not in the Motif Atlas
- Homologous match to HL_4V88_203
- Geometric discrepancy: 0.2932
- The information below is about HL_4V88_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
6ZXH|1|2|U|820
6ZXH|1|2|G|821
6ZXH|1|2|PSU|822
6ZXH|1|2|U|823
6ZXH|1|2|C|824
6ZXH|1|2|A|825
6ZXH|1|2|A|826
6ZXH|1|2|A|827
6ZXH|1|2|G|828
Current chains
- Chain 2
- pre-18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein S4, X isoform
- Chain J
- 40S ribosomal protein S9
- Chain Y
- 40S ribosomal protein S24
Coloring options: