HL_7A09_012

3D structure

PDB id

7A09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GACUCUUUCGAGGCC

Length

15 nucleotides

Bulged bases

7A09|1|2|U|541, 7A09|1|2|G|547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A09|1|2|G|535
7A09|1|2|A|536
7A09|1|2|C|537
7A09|1|2|U|538
7A09|1|2|C|539
7A09|1|2|U|540
7A09|1|2|U|541
7A09|1|2|U|542
7A09|1|2|C|543
7A09|1|2|G|544
7A09|1|2|A|545
7A09|1|2|G|546
7A09|1|2|G|547
7A09|1|2|C|548
7A09|1|2|C|549

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain B

Eukaryotic translation initiation factor 3 subunit B

Chain T

40S ribosomal protein S30

Chain X

RNA recognition motif