HL_7A09_015

3D structure

PDB id

7A09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A09_015 not in the Motif Atlas

Geometric match to HL_7A0S_047

Geometric discrepancy: 0.2277

The information below is about HL_7A0S_047

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7A09|1|2|C|711
7A09|1|2|G|712
7A09|1|2|C|713
7A09|1|2|G|714
7A09|1|2|A|715
7A09|1|2|G|716

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain A

Eukaryotic translation initiation factor 3 subunit A