HL_7A09_037
3D structure
- PDB id
- 7A09 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human ABCE1-bound 43S pre-initiation complex - State III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCCCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7A09_037 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.2414
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
7A09|1|f|G|31
7A09|1|f|C|32
7A09|1|f|C|33
7A09|1|f|C|34
7A09|1|f|A|35
7A09|1|f|U|36
7A09|1|f|A|37
7A09|1|f|A|38
7A09|1|f|C|39
Current chains
- Chain f
- tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- Eukaryotic translation initiation factor 2 subunit 2
- Chain O
- Eukaryotic translation initiation factor 2 subunit 1
- Chain g
- 40S ribosomal protein S16
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