HL_7A0S_008

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67216.8

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

9

Unit IDs

7A0S|1|X|C|223
7A0S|1|X|G|224
7A0S|1|X|G|225
7A0S|1|X|C|226
7A0S|1|X|G|227
7A0S|1|X|A|228
7A0S|1|X|G|229

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain 3

50S ribosomal protein L35

Chain I

50S ribosomal protein L15

Chain U

50S ribosomal protein L28