3D structure

PDB id
7A0S (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S Deinococcus radiodurans ribosome bounded with mycinamicin I
Experimental method
X-RAY DIFFRACTION
Resolution
3.22 Å

Loop

Sequence
CUGGAAAG
Length
8 nucleotides
Bulged bases
7A0S|1|X|A|322
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
T-loop with 1 bulged base
Broad Annotation
T-loop
Motif group
HL_58705.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
23

Unit IDs

7A0S|1|X|C|316
7A0S|1|X|U|317
7A0S|1|X|G|318
7A0S|1|X|G|319
7A0S|1|X|A|320
7A0S|1|X|A|321
7A0S|1|X|A|322
7A0S|1|X|G|323

Current chains

Chain X
RNA (2732-MER)

Nearby chains

Chain P
50S ribosomal protein L22
Chain R
50S ribosomal protein L24

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.063 s