HL_7A0S_012

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GUGAGAGUC

Length

9 nucleotides

Bulged bases

7A0S|1|X|G|340

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08002.10

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

19

Unit IDs

7A0S|1|X|G|338
7A0S|1|X|U|339
7A0S|1|X|G|340
7A0S|1|X|A|341
7A0S|1|X|G|342
7A0S|1|X|A|343
7A0S|1|X|G|344
7A0S|1|X|U|345
7A0S|1|X|C|346

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain C

50S ribosomal protein L4

Chain P

50S ribosomal protein L22

Chain R

50S ribosomal protein L24