3D structure

PDB id
7A0S (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S Deinococcus radiodurans ribosome bounded with mycinamicin I
Experimental method
X-RAY DIFFRACTION
Resolution
3.22 Å

Loop

Sequence
GUGAGAAUC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
T-loop with 2 stacked bulged bases
Broad Annotation
T-loop
Motif group
HL_43993.1
Basepair signature
cWW-tWH-F-F-F-F-F
Number of instances in this motif group
141

Unit IDs

7A0S|1|X|G|1294
7A0S|1|X|U|1295
7A0S|1|X|G|1296
7A0S|1|X|A|1297
7A0S|1|X|G|1298
7A0S|1|X|A|1299
7A0S|1|X|A|1300
7A0S|1|X|U|1301
7A0S|1|X|C|1302

Current chains

Chain X
RNA (2732-MER)

Nearby chains

Chain K
50S ribosomal protein L17
Chain P
50S ribosomal protein L22
Chain Z
50S ribosomal protein L32

Coloring options:

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