HL_7A0S_048

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases (A, C, G, U)

1938U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51824.2

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

8

Unit IDs

7A0S|1|X|G|1932
7A0S|1|X|G|1933
7A0S|1|X|U|1934
7A0S|1|X|A|1935
7A0S|1|X|A|1936
7A0S|1|X|G|1937
7A0S|1|X|U|1938
7A0S|1|X|U|1939
7A0S|1|X|C|1940

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain H

50S ribosomal protein L14