HL_7A0S_053

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CCAAAAUGUAACG

Length

13 nucleotides

Bulged bases (A, C, G, U)

2247A, 2254C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.7

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|C|2243
7A0S|1|X|C|2244
7A0S|1|X|A|2245
7A0S|1|X|A|2246
7A0S|1|X|A|2247
7A0S|1|X|A|2248
7A0S|1|X|U|2249
7A0S|1|X|G|2250
7A0S|1|X|U|2251
7A0S|1|X|A|2252
7A0S|1|X|A|2253
7A0S|1|X|C|2254
7A0S|1|X|G|2255

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain J

50S ribosomal protein L16

Chain T

50S ribosomal protein L27