HL_7A0S_058

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

7A0S|1|X|U|2385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7A0S|1|X|C|2383
7A0S|1|X|G|2384
7A0S|1|X|U|2385
7A0S|1|X|G|2386
7A0S|1|X|U|2387
7A0S|1|X|G|2388
7A0S|1|X|G|2389
7A0S|1|X|A|2390
7A0S|1|X|A|2391
7A0S|1|X|G|2392

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain I

50S ribosomal protein L15

Chain U

50S ribosomal protein L28