HL_7A0S_059

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.3

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

7A0S|1|X|A|2450
7A0S|1|X|G|2451
7A0S|1|X|U|2452
7A0S|1|X|C|2453
7A0S|1|X|C|2454
7A0S|1|X|A|2455
7A0S|1|X|U|2456
7A0S|1|X|A|2457
7A0S|1|X|U|2458

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain E

50S ribosomal protein L6