HL_7A0S_060

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases (A, C, G, U)

2508G

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.2

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

7A0S|1|X|U|2507
7A0S|1|X|G|2508
7A0S|1|X|A|2509
7A0S|1|X|A|2510
7A0S|1|X|G|2511
7A0S|1|X|A|2512
7A0S|1|X|A|2513
7A0S|1|X|G|2514

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain E

50S ribosomal protein L6