HL_7A0S_065

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases (A, C, G, U)

2731G, 2735C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.8

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

7A0S|1|X|C|2725
7A0S|1|X|U|2726
7A0S|1|X|G|2727
7A0S|1|X|A|2728
7A0S|1|X|A|2729
7A0S|1|X|A|2730
7A0S|1|X|G|2731
7A0S|1|X|C|2732
7A0S|1|X|A|2733
7A0S|1|X|U|2734
7A0S|1|X|C|2735
7A0S|1|X|U|2736
7A0S|1|X|A|2737
7A0S|1|X|A|2738
7A0S|1|X|G|2739

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain E

50S ribosomal protein L6

Chain G

50S ribosomal protein L13