HL_7A0S_073

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UCAAUG

Length

6 nucleotides

Bulged bases

7A0S|1|X|U|1651

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Pseudoknot geometry with 3' bulge

Broad Annotation

No text annotation

Motif group

HL_57176.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

14

Unit IDs

7A0S|1|X|U|1647
7A0S|1|X|C|1648
7A0S|1|X|A|1649
7A0S|1|X|A|1650
7A0S|1|X|U|1651
7A0S|1|X|G|1652

Current chains

Chain X

RNA (2732-MER)

Nearby chains