HL_7A1G_017

3D structure

PDB id

7A1G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGCUAACCUUGAGCUUGGCGAACC

Length

24 nucleotides

Bulged bases

7A1G|1|2|A|713, 7A1G|1|2|C|726, 7A1G|1|2|A|733

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A1G|1|2|G|702
7A1G|1|2|G|703
7A1G|1|2|C|704
7A1G|1|2|U|705
7A1G|1|2|A|706
7A1G|1|2|A|707
7A1G|1|2|C|708
7A1G|1|2|C|709
7A1G|1|2|U|710
7A1G|1|2|U|711
7A1G|1|2|G|712
7A1G|1|2|A|713
7A1G|1|2|G|714
7A1G|1|2|C|726
7A1G|1|2|U|727
7A1G|1|2|U|728
7A1G|1|2|G|729
7A1G|1|2|G|730
7A1G|1|2|C|731
7A1G|1|2|G|732
7A1G|1|2|A|733
7A1G|1|2|A|734
7A1G|1|2|C|735
7A1G|1|2|C|736

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S

40S ribosomal protein S4-A

Chain T

40S ribosomal protein S6-A