3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
UCACCCUA
Length
8 nucleotides
Bulged bases
7A5G|1|A3|C|2283
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7A5G_017 not in the Motif Atlas
Geometric match to HL_1KH6_003
Geometric discrepancy: 0.3196
The information below is about HL_1KH6_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_33487.1
Basepair signature
cWW-cWW
Number of instances in this motif group
2

Unit IDs

7A5G|1|A3|U|2279
7A5G|1|A3|C|2280
7A5G|1|A3|A|2281
7A5G|1|A3|C|2282
7A5G|1|A3|C|2283
7A5G|1|A3|C|2284
7A5G|1|A3|U|2285
7A5G|1|A3|A|2286

Current chains

Chain A3
16S rRNA

Nearby chains

Chain F3
39S ribosomal protein L4, mitochondrial
Chain M3
39S ribosomal protein L15, mitochondrial
Chain b3
39S ribosomal protein L43, mitochondrial
Chain c3
39S ribosomal protein L44, mitochondrial
Chain h3
39S ribosomal protein L50, mitochondrial
Chain i3
39S ribosomal protein L51, mitochondrial
Chain o3
Ribosomal protein 63, mitochondrial

Coloring options:


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