3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
GUGAAGAGGC
Length
10 nucleotides
Bulged bases
7A5G|1|A3|A|2693, 7A5G|1|A3|A|2694, 7A5G|1|A3|G|2695
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7A5G_027 not in the Motif Atlas
Homologous match to HL_4WF9_047
Geometric discrepancy: 0.1683
The information below is about HL_4WF9_047
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_78372.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
10

Unit IDs

7A5G|1|A3|G|2690
7A5G|1|A3|U|2691
7A5G|1|A3|G|2692
7A5G|1|A3|A|2693
7A5G|1|A3|A|2694
7A5G|1|A3|G|2695
7A5G|1|A3|A|2696
7A5G|1|A3|G|2697
7A5G|1|A3|G|2698
7A5G|1|A3|C|2699

Current chains

Chain A3
16S rRNA

Nearby chains

Chain 03
39S ribosomal protein L32, mitochondrial
Chain E3
39S ribosomal protein L3, mitochondrial
Chain S3
39S ribosomal protein L21, mitochondrial
Chain o3
Ribosomal protein 63, mitochondrial
Chain r3
39S ribosomal protein S18a, mitochondrial

Coloring options:


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