3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
AUAACU
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7A5G_032 not in the Motif Atlas
Geometric match to HL_3IGI_006
Geometric discrepancy: 0.1705
The information below is about HL_3IGI_006
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_34789.4
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
399

Unit IDs

7A5G|1|A3|A|2902
7A5G|1|A3|U|2903
7A5G|1|A3|A|2904
7A5G|1|A3|A|2905
7A5G|1|A3|C|2906
7A5G|1|A3|U|2907

Current chains

Chain A3
16S rRNA

Nearby chains

Chain 13
39S ribosomal protein L33, mitochondrial
Chain 33
39S ribosomal protein L35, mitochondrial
Chain C
Transfer RNA; tRNA
Chain X3
39S ribosomal protein L28, mitochondrial

Coloring options:


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