HL_7A5G_047

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

CCACCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5G_047 not in the Motif Atlas

Geometric match to HL_4V9F_040

Geometric discrepancy: 0.2753

The information below is about HL_4V9F_040

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7A5G|1|A6|C|898
7A5G|1|A6|C|899
7A5G|1|A6|A|900
7A5G|1|A6|C|901
7A5G|1|A6|C|902
7A5G|1|A6|G|903

Current chains

Chain A6

12S rRNA

Nearby chains

Chain J6

28S ribosomal protein S12, mitochondrial

Chain O6

28S ribosomal protein S18b, mitochondrial

Chain i4

mRNA