HL_7A5G_052

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

CCACAG

Length

6 nucleotides

Bulged bases

7A5G|1|A6|C|1155, 7A5G|1|A6|A|1158

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5G_052 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.2757

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7A5G|1|A6|C|1154
7A5G|1|A6|C|1155
7A5G|1|A6|A|1156
7A5G|1|A6|C|1157
7A5G|1|A6|A|1158
7A5G|1|A6|G|1159

Current chains

Chain A6

12S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain L6

28S ribosomal protein S15, mitochondrial

Chain d6

Aurora kinase A-interacting protein