HL_7A5G_064

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

UAGCGGUUA

Length

9 nucleotides

Bulged bases

7A5G|1|j|G|18, 7A5G|1|j|G|19, 7A5G|1|j|U|20

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5G_064 not in the Motif Atlas

Homologous match to HL_4YYE_001

Geometric discrepancy: 0.2859

The information below is about HL_4YYE_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A5G|1|j|U|13
7A5G|1|j|A|14
7A5G|1|j|G|15
7A5G|1|j|C|16
7A5G|1|j|G|18
7A5G|1|j|G|19
7A5G|1|j|U|20
7A5G|1|j|U|21
7A5G|1|j|A|22

Current chains

Chain j

E tRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain J6

28S ribosomal protein S12, mitochondrial