3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
UUAACUAAA
Length
9 nucleotides
Bulged bases
7A5G|1|A6|C|1529, 7A5G|1|A6|U|1530
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7A5G_070 not in the Motif Atlas
Geometric match to HL_6CF2_001
Geometric discrepancy: 0.2767
The information below is about HL_6CF2_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_92598.1
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
13

Unit IDs

7A5G|1|A6|U|1525
7A5G|1|A6|U|1526
7A5G|1|A6|A|1527
7A5G|1|A6|A|1528
7A5G|1|A6|C|1529
7A5G|1|A6|U|1530
7A5G|1|A6|A|1531
7A5G|1|A6|A|1532
7A5G|1|A6|A|1533

Current chains

Chain A6
12S rRNA

Nearby chains

Chain V6
28S ribosomal protein S27, mitochondrial
Chain a6
28S ribosomal protein S34, mitochondrial

Coloring options:


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