3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
GUAGCUUAAAUUAUCAAAGCAAGGCACUGAAAAUGCCUAGAUGAGCCUCACAGCUCC
Length
57 nucleotides
Bulged bases
7A5G|1|C|U|8, 7A5G|1|C|U|17, 7A5G|1|C|U|18, 7A5G|1|C|A|45
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7A5G|1|C|G|7
7A5G|1|C|U|8
7A5G|1|C|A|9
7A5G|1|C|G|10
7A5G|1|C|C|11
7A5G|1|C|U|12
7A5G|1|C|U|13
7A5G|1|C|A|14
7A5G|1|C|A|15
7A5G|1|C|A|16
7A5G|1|C|U|17
7A5G|1|C|U|18
7A5G|1|C|A|19
7A5G|1|C|U|20
7A5G|1|C|C|21
7A5G|1|C|A|22
7A5G|1|C|A|23
7A5G|1|C|A|24
7A5G|1|C|G|25
7A5G|1|C|C|26
7A5G|1|C|A|27
7A5G|1|C|A|28
7A5G|1|C|G|29
7A5G|1|C|G|30
7A5G|1|C|C|31
7A5G|1|C|A|32
7A5G|1|C|C|33
7A5G|1|C|U|34
7A5G|1|C|G|35
7A5G|1|C|A|36
7A5G|1|C|A|37
7A5G|1|C|A|38
7A5G|1|C|A|39
7A5G|1|C|U|40
7A5G|1|C|G|41
7A5G|1|C|C|42
7A5G|1|C|C|43
7A5G|1|C|U|44
7A5G|1|C|A|45
7A5G|1|C|G|46
7A5G|1|C|A|47
7A5G|1|C|U|48
7A5G|1|C|G|49
7A5G|1|C|A|50
7A5G|1|C|G|51
7A5G|1|C|C|52
7A5G|1|C|C|53
7A5G|1|C|U|54
7A5G|1|C|C|55
7A5G|1|C|A|56
7A5G|1|C|C|57
7A5G|1|C|A|58
7A5G|1|C|G|59
7A5G|1|C|C|60
7A5G|1|C|U|61
7A5G|1|C|C|62
7A5G|1|C|C|63

Current chains

Chain C
P tRNA

Nearby chains

Chain 13
39S ribosomal protein L33, mitochondrial
Chain 24
Transfer RNA; tRNA
Chain A6
Small subunit ribosomal RNA; SSU rRNA
Chain F6
28S ribosomal protein S7, mitochondrial
Chain I6
28S ribosomal protein S11, mitochondrial
Chain c6
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
Chain i4
mRNA
Chain n
50S ribosomal protein L1
Chain q3
Growth arrest and DNA damage-inducible proteins-interacting protein 1

Coloring options:

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