HL_7A5I_006

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_006 not in the Motif Atlas

Homologous match to HL_7A0S_015

Geometric discrepancy: 0.0756

The information below is about HL_7A0S_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7A5I|1|A3|C|1786
7A5I|1|A3|G|1787
7A5I|1|A3|C|1788
7A5I|1|A3|A|1789
7A5I|1|A3|A|1790
7A5I|1|A3|G|1791

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 23

39S ribosomal protein L34, mitochondrial

Chain 93

39S ribosomal protein L41, mitochondrial

Chain F3

39S ribosomal protein L4, mitochondrial

Chain Y2

nascent chain