HL_7A5I_018

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCUAAAAGCAG

Length

11 nucleotides

Bulged bases

7A5I|1|A3|A|2181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_018 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.2622

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7A5I|1|A3|C|2175
7A5I|1|A3|C|2176
7A5I|1|A3|U|2177
7A5I|1|A3|A|2178
7A5I|1|A3|A|2179
7A5I|1|A3|A|2180
7A5I|1|A3|A|2181
7A5I|1|A3|G|2182
7A5I|1|A3|C|2183
7A5I|1|A3|A|2184
7A5I|1|A3|G|2185

Current chains

Chain A3

16S rRNA

Nearby chains

Chain J3

39S ribosomal protein L11, mitochondrial

Chain l3

39S ribosomal protein L54, mitochondrial

Chain t3

Unknown protein/protein extension